@> 6167 atoms and 1 coordinate set(s) were parsed in 0.16s.
@> 3328 atoms and 1 coordinate set(s) were parsed in 0.09s.

Visualizations and results¶

Original Structure Visualization¶

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@> 6167 atoms and 1 coordinate set(s) were parsed in 0.16s.
@> 3328 atoms and 1 coordinate set(s) were parsed in 0.09s.
3j9cA_TEMP
Blue:4h2aA
Red:3j9cA

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AlphaFold predictions¶

Best AF prediction to fold 1¶

@> 5593 atoms and 1 coordinate set(s) were parsed in 0.15s.
@> 6167 atoms and 1 coordinate set(s) were parsed in 0.16s.
@> 5593 atoms and 1 coordinate set(s) were parsed in 0.15s.
@> 6167 atoms and 1 coordinate set(s) were parsed in 0.16s.
4h2aA_TEMP
Blue:ShallowMsa_001_unrelaxed_rank_003_alphafold2_ptm_model_2_seed_000
Red:4h2aA

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Best AF prediction to fold 2¶

@> 5593 atoms and 1 coordinate set(s) were parsed in 0.15s.
@> 3328 atoms and 1 coordinate set(s) were parsed in 0.09s.
@> 5593 atoms and 1 coordinate set(s) were parsed in 0.15s.
@> 3328 atoms and 1 coordinate set(s) were parsed in 0.09s.
3j9cA_TEMP
Blue:ShallowMsa_004_unrelaxed_rank_004_alphafold2_ptm_model_1_seed_000
Red:3j9cA

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EsmFold Prediction¶

Best EsmFold prediction to fold 1¶

@> 6167 atoms and 1 coordinate set(s) were parsed in 0.16s.
@> 4417 atoms and 1 coordinate set(s) were parsed in 0.12s.
@> 6167 atoms and 1 coordinate set(s) were parsed in 0.16s.
reference and target coordinate arrays must have same number of atoms
@> 4417 atoms and 1 coordinate set(s) were parsed in 0.12s.
ShallowMsa_005_2_TEMP
Blue:4h2aA
Red:ShallowMsa_005_2

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Best EsmFold prediction to fold 2¶

@> 3328 atoms and 1 coordinate set(s) were parsed in 0.09s.
@> 4369 atoms and 1 coordinate set(s) were parsed in 0.12s.
@> 3328 atoms and 1 coordinate set(s) were parsed in 0.09s.
@> 4369 atoms and 1 coordinate set(s) were parsed in 0.11s.
reference and target coordinate arrays must have same number of atoms
ShallowMsa_006_3_TEMP
Blue:3j9cA
Red:ShallowMsa_006_3

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Contact maps Msa Transformers¶

No max_f1Score_pdb2
No max_f1Score_pdb2
No plot for f1Score_1
No plot for f1Score_2
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No description has been provided for this image
No description has been provided for this image